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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862256.1_cds_XP_016515239.1_27605
CDS Infomation

[gene=LOC107831959] [db_xref=GeneID:107831959] [protein=phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1-like isoform X3] [protein_id=XP_016515239.1] [location=join(31770..31779,31891..31970,33915..34307,34405..34545,34627..34730,34821..35042,35255..35749,37114..37529,39309..39402,40039..40174)] [gbkey=CDS]
Sequence

ATGAGAAGAGCTTCTTTCGACATTGTTGTCGCTTTTGCTTGCGATGAGTCTGCCCTTCTT
TCCATGACCACCACACATACGAATCTTGAGAGGGTTCTTCAAGGCATAAACAGAAAGATG
CCTGTACTTCTACAAGGTAAAAGCAAGTTCTCTCTGCTTGGTTCTTATGCAGCAGATTGT
AACAGCAAGGGGCAGTTGCTAATGGTCAGAGGCAAAGGGAAGAAGCATATCAACTCTACT
GGCAAGAGGACATGCTTATGTGTGGACGAACTTGCACCTGAAGGGAAGTGGGGAAGACGG
AGATGTGGATGTCACAAATTGGATGTGATACTAGAGCAGTGTAGGGCATTAGCTTTAGAG
GATAACATTTGGGCACAGATTGTATGTGATGATTCTCAAGCTGTTGGCAGAAAAGTAGAG
CTAATACCAAAAGTGCATCATATACATAGGAAGGGAGAAGCCATATTCCAATTAGATGTC
CACGTAGTGTTTTATGGAATTCCTGTCTTTGGTGGCCACCATTACTCATTGGGCTTCAAG
AGTTCATCTGAGGGGGTGACAAACCATTGCAAGAAGCCTGAATGGGTTAAGGATCTTAAC
AGGAAGCAACCATATCTTGACTTGGATGCTGTAATTCTATCTATCAACACTGCTAATGCT
GCTAAAGTATTTACCGAAGCATATTGTTCTGCCAAAAGATCCAGGGTTTCCTTCCATTTC
TTTTGCATGTTTTCTATTTTGACATGGCAACTGCTTGCTGTATTGGTTGCATCATTGTCA
ACTATCTTCTACGTCATCCTTCAGTCTTTCCATGTCTGTTTGAGCCATGTGTCCCAATCA
TATATCTACGTCGCATTGGAGAAGGTATTCTGCAATACATGTAAAAATCTAGAAATCCGA
TGCTGCCAACTCCTGTATTGGCCAGTTTTTCTCAAAGATTATGGTCTCAGGTCTCAATCT
TGTGTGGAGTATGCTGAGAAAGCAGCATTTCACAAACATTCCATGTGGACAAGCCTTGTA
GTTGATCTACTTCTGGGGAACTTTCTTGGCATCATATTGTGGTGTCGAGCAAGAGAAACT
TGTGCATGGGTTTCGAGTTTTTCTGAAAATGCCACTAACTATCTTCTGCGTACTGGTTGT
GTGTGGCTTATGGGAAACCCAGCGGGATTCAAGCTGAACACTGAGCTAGCTGGAGTTCTT
GGGACAATATCCCTGATTGCTATTCAAATTTGGTCTACCATTTGGTGGTTATTGGGTTTA
TTCTTGATTCATCTCATAAAAGTAGTTGCTGTATTTGGTTCATTATTTGGGCTTACTGCA
GCAGCTGCTCTTATCATTGACACAATTTCACTAGCAACAACACATGTTTCTACTCTTCAG
TGGTTGCTTACACTGCTCTATTCATGGCAAATACAGGCTGTAGATGCTTTATGGCGTCTT
TTCAGGGGTAGGAAGTGGAATCCTCTTCGTCAGAGACTAGACAGCTATGCATACAGTGTG
GAGCAGCATGTAGTTGGGTCTCTCCTATTTACTCCACTTCTACTTCTGCTGCCGACGACT
TCATTGTTCTATATTTTCTTCACCATTATGAAGACAACCATTAGCTTTGTCTGCATAGCC
ATTCAGTTTGGCATATCTATAATTCACGCCACACCGTACATTAAGATTTTCTTTTGGTTC
ATGAGGAGGAAACGGTTTCCTTGTGGATTATGGTTTGATATTGTTTTGTGTCGGAGAAAT
GCCACTAATTCATTAGAGGTCGAATCTGCTGATAAGACTGCATCTGAGAATTCTCGCCAC
AGAAGCTGCTCTAAATCGACAATTCTGGTTTCATTTCTTCACAGCAATTTTTTGAGCTTA
AGACAAGTAGTTTGGCCCCACTATCGAAATGTTTTTTCAGATGTATCTAGATCTTCTATT
GCGTTCTCAGCTTATGGAGTTCTTACCGGGAAAAGAACTCCATCAGCTCCAAAGATTGGT
CTTCCCCCGATGTTGCCATGGGTGTCTATTCCATACAAAGAATACTGGCGCCTTTGCCAT
GAAGCAGTCCTCGCTTGCAGGCAAGATTGCAACTGCCAATTGCACCAATAG

Peptide Sequence

PEP ID

XP_016515239.1
PEP Infomation

PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit GPI1-like isoform X3 [Nicotiana tabacum]
Sequence

MRRASFDIVVAFACDESALLSMTTTHTNLERVLQGINRKMPVLLQGKSKFSLLGSYAADC
NSKGQLLMVRGKGKKHINSTGKRTCLCVDELAPEGKWGRRRCGCHKLDVILEQCRALALE
DNIWAQIVCDDSQAVGRKVELIPKVHHIHRKGEAIFQLDVHVVFYGIPVFGGHHYSLGFK
SSSEGVTNHCKKPEWVKDLNRKQPYLDLDAVILSINTANAAKVFTEAYCSAKRSRVSFHF
FCMFSILTWQLLAVLVASLSTIFYVILQSFHVCLSHVSQSYIYVALEKVFCNTCKNLEIR
CCQLLYWPVFLKDYGLRSQSCVEYAEKAAFHKHSMWTSLVVDLLLGNFLGIILWCRARET
CAWVSSFSENATNYLLRTGCVWLMGNPAGFKLNTELAGVLGTISLIAIQIWSTIWWLLGL
FLIHLIKVVAVFGSLFGLTAAAALIIDTISLATTHVSTLQWLLTLLYSWQIQAVDALWRL
FRGRKWNPLRQRLDSYAYSVEQHVVGSLLFTPLLLLLPTTSLFYIFFTIMKTTISFVCIA
IQFGISIIHATPYIKIFFWFMRRKRFPCGLWFDIVLCRRNATNSLEVESADKTASENSRH
RSCSKSTILVSFLHSNFLSLRQVVWPHYRNVFSDVSRSSIAFSAYGVLTGKRTPSAPKIG
LPPMLPWVSIPYKEYWRLCHEAVLACRQDCNCQLHQ

Transcript Sequence

Gene sequence data has not been registered.